Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.15■□□□□ 0.34
Ccdc7Q9D541 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc7Q9D541 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc7Q9D541 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc7Q9D541 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc7Q9D541 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc7Q9D541 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc7Q9D541 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Gm2651-201ENSMUST00000203560 838 ntBASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc7Q9D541 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Gm27301-201ENSMUST00000184012 127 ntBASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Gm17968-201ENSMUST00000194902 784 ntBASIC17.11■□□□□ 0.33
Ccdc7Q9D541 Gm45747-201ENSMUST00000212203 999 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms