Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm24694-201ENSMUST00000180054 110 ntBASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm27663-201ENSMUST00000184839 110 ntBASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf8Q99PV0 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.02□□□□□ -0.49
Prpf8Q99PV0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Gm6888-201ENSMUST00000221983 706 ntBASIC12.02□□□□□ -0.49
Prpf8Q99PV0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf8Q99PV0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms