Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.37□□□□□ -0.11
Trim16Q99PP9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim16Q99PP9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim16Q99PP9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Gm18206-201ENSMUST00000207027 926 ntBASIC14.36□□□□□ -0.11
Trim16Q99PP9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.36□□□□□ -0.11
Trim16Q99PP9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.36□□□□□ -0.11
Trim16Q99PP9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim16Q99PP9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.35□□□□□ -0.11
Trim16Q99PP9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim16Q99PP9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.34□□□□□ -0.11
Trim16Q99PP9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.34□□□□□ -0.11
Trim16Q99PP9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.34□□□□□ -0.11
Trim16Q99PP9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim16Q99PP9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms