Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Gm44492-201ENSMUST00000197012 141 ntBASIC14.56□□□□□ -0.08
Trim33Q99PP7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.56□□□□□ -0.08
Trim33Q99PP7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.56□□□□□ -0.08
Trim33Q99PP7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.56□□□□□ -0.08
Trim33Q99PP7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim33Q99PP7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.55□□□□□ -0.08
Trim33Q99PP7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.55□□□□□ -0.08
Trim33Q99PP7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim33Q99PP7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.54□□□□□ -0.08
Trim33Q99PP7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.54□□□□□ -0.08
Trim33Q99PP7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.54□□□□□ -0.08
Trim33Q99PP7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.54□□□□□ -0.08
Trim33Q99PP7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.54□□□□□ -0.08
Trim33Q99PP7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms