Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Gm15429-201ENSMUST00000151268 798 ntBASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm43758-201ENSMUST00000199500 367 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm19078-201ENSMUST00000206311 727 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh23Q99PF4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.67□□□□□ -0.06
Cdh23Q99PF4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Gm45880-201ENSMUST00000213041 853 ntBASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Gm11793-201ENSMUST00000120433 981 ntBASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh23Q99PF4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Gm11524-201ENSMUST00000119349 807 ntBASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.65□□□□□ -0.06
Cdh23Q99PF4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh23Q99PF4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms