Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Gm15039-201ENSMUST00000118914 875 ntBASIC12.51□□□□□ -0.41
Smim3Q99PE5 Gm11355-201ENSMUST00000121120 306 ntBASIC12.51□□□□□ -0.41
Smim3Q99PE5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Mir770-201ENSMUST00000103252 94 ntBASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.5□□□□□ -0.41
Smim3Q99PE5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.5□□□□□ -0.41
Smim3Q99PE5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim3Q99PE5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.49□□□□□ -0.41
Smim3Q99PE5 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.49□□□□□ -0.41
Smim3Q99PE5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim3Q99PE5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms