Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.79□□□□□ -0.04
Cdk9Q99J95 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.79□□□□□ -0.04
Cdk9Q99J95 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk9Q99J95 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.78□□□□□ -0.04
Cdk9Q99J95 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk9Q99J95 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk9Q99J95 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.77□□□□□ -0.04
Cdk9Q99J95 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk9Q99J95 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms