Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Gm9522-201ENSMUST00000182394 926 ntBASIC16.75■□□□□ 0.27
Trex1Q91XB0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.75■□□□□ 0.27
Trex1Q91XB0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trex1Q91XB0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm22189-201ENSMUST00000103822 86 ntBASIC16.74■□□□□ 0.27
Trex1Q91XB0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.74■□□□□ 0.27
Trex1Q91XB0 Gm7653-201ENSMUST00000214567 508 ntBASIC16.74■□□□□ 0.27
Trex1Q91XB0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trex1Q91XB0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm14928-201ENSMUST00000120198 477 ntBASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm42612-201ENSMUST00000197986 623 ntBASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm43170-201ENSMUST00000199827 612 ntBASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm9794-201ENSMUST00000202370 423 ntBASIC16.73■□□□□ 0.27
Trex1Q91XB0 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.73■□□□□ 0.27
Trex1Q91XB0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trex1Q91XB0 Sybu-209ENSMUST00000228639 4113 ntBASIC16.72■□□□□ 0.27
Trex1Q91XB0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 BC001981-202ENSMUST00000191393 1545 ntBASIC16.72■□□□□ 0.27
Trex1Q91XB0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 AA619741-201ENSMUST00000195095 646 ntBASIC16.72■□□□□ 0.27
Trex1Q91XB0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms