Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cd109Q8R422 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd109Q8R422 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.6■□□□□ 0.89
Cd109Q8R422 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cd109Q8R422 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.6■□□□□ 0.89
Cd109Q8R422 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cd109Q8R422 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.6■□□□□ 0.89
Cd109Q8R422 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Cd109Q8R422 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cd109Q8R422 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cd109Q8R422 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Gm15678-201ENSMUST00000117573 960 ntBASIC20.6■□□□□ 0.89
Cd109Q8R422 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Gm18187-201ENSMUST00000196476 984 ntBASIC20.6■□□□□ 0.89
Cd109Q8R422 Gm19220-201ENSMUST00000222682 803 ntBASIC20.6■□□□□ 0.89
Cd109Q8R422 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd109Q8R422 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cd109Q8R422 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Gm14127-201ENSMUST00000117906 678 ntBASIC20.59■□□□□ 0.89
Cd109Q8R422 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC20.59■□□□□ 0.89
Cd109Q8R422 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
Cd109Q8R422 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cd109Q8R422 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cd109Q8R422 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC20.59■□□□□ 0.89
Cd109Q8R422 AC162801.1-201ENSMUST00000220612 198 ntBASIC20.59■□□□□ 0.89
Cd109Q8R422 AC159006.1-201ENSMUST00000226396 258 ntBASIC20.59■□□□□ 0.89
Cd109Q8R422 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.59■□□□□ 0.89
Cd109Q8R422 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd109Q8R422 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cd109Q8R422 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Cd109Q8R422 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd109Q8R422 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Cdk7-205ENSMUST00000225990 1159 ntBASIC20.58■□□□□ 0.88
Cd109Q8R422 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd109Q8R422 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cd109Q8R422 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms