Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 AA619741-201ENSMUST00000195095 646 ntBASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Gm42612-201ENSMUST00000197986 623 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Gm43170-201ENSMUST00000199827 612 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Sybu-209ENSMUST00000228639 4113 ntBASIC18.68■□□□□ 0.58
Chmp7Q8R1T1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp7Q8R1T1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Gm14042-201ENSMUST00000120139 833 ntBASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Gm6745-201ENSMUST00000199216 526 ntBASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp7Q8R1T1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms