Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Gm27300-201ENSMUST00000184085 97 ntBASIC18.14■□□□□ 0.49
Smc5Q8CG46 Gm27335-201ENSMUST00000184758 97 ntBASIC18.14■□□□□ 0.49
Smc5Q8CG46 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.14■□□□□ 0.49
Smc5Q8CG46 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.14■□□□□ 0.49
Smc5Q8CG46 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Gm13597-201ENSMUST00000121239 375 ntBASIC18.13■□□□□ 0.49
Smc5Q8CG46 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smc5Q8CG46 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc5Q8CG46 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Gm13036-201ENSMUST00000117799 748 ntBASIC18.12■□□□□ 0.49
Smc5Q8CG46 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.12■□□□□ 0.49
Smc5Q8CG46 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.12■□□□□ 0.49
Smc5Q8CG46 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc5Q8CG46 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Gm9103-201ENSMUST00000119371 405 ntBASIC18.11■□□□□ 0.49
Smc5Q8CG46 Gm2272-201ENSMUST00000194903 582 ntBASIC18.11■□□□□ 0.49
Smc5Q8CG46 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc5Q8CG46 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.1■□□□□ 0.49
Smc5Q8CG46 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.1■□□□□ 0.49
Smc5Q8CG46 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm7977-201ENSMUST00000193787 748 ntBASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms