Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.52■□□□□ 0.88
Usp54Q8BL06 Gm8598-201ENSMUST00000221184 836 ntBASIC20.52■□□□□ 0.88
Usp54Q8BL06 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.52■□□□□ 0.88
Usp54Q8BL06 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.52■□□□□ 0.88
Usp54Q8BL06 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp54Q8BL06 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp54Q8BL06 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm43094-201ENSMUST00000196549 921 ntBASIC20.51■□□□□ 0.87
Usp54Q8BL06 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm17794-201ENSMUST00000220252 955 ntBASIC20.51■□□□□ 0.87
Usp54Q8BL06 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp54Q8BL06 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm21038-201ENSMUST00000222205 1383 ntBASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm8652-201ENSMUST00000181363 964 ntBASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Gm7287-201ENSMUST00000205267 602 ntBASIC20.5■□□□□ 0.87
Usp54Q8BL06 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Mir497b-201ENSMUST00000093601 125 ntBASIC20.5■□□□□ 0.87
Usp54Q8BL06 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp54Q8BL06 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Gm23931-201ENSMUST00000103842 109 ntBASIC20.49■□□□□ 0.87
Usp54Q8BL06 Gm12742-201ENSMUST00000117326 410 ntBASIC20.49■□□□□ 0.87
Usp54Q8BL06 Gm45784-201ENSMUST00000188360 142 ntBASIC20.49■□□□□ 0.87
Usp54Q8BL06 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.49■□□□□ 0.87
Usp54Q8BL06 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC20.49■□□□□ 0.87
Usp54Q8BL06 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp54Q8BL06 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.48■□□□□ 0.87
Usp54Q8BL06 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 AC159196.2-201ENSMUST00000224082 1622 ntBASIC20.48■□□□□ 0.87
Usp54Q8BL06 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms