Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc40Q8BI79 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Gm18246-201ENSMUST00000221023 728 ntBASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc40Q8BI79 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc40Q8BI79 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Gm27741-201ENSMUST00000185060 237 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Gm15590-201ENSMUST00000078419 552 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.31■□□□□ 0.04
Ccdc40Q8BI79 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms