Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clrn3Q8BHH8 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm44771-201ENSMUST00000206975 626 ntBASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clrn3Q8BHH8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Gm9727-201ENSMUST00000161387 555 ntBASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn3Q8BHH8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms