Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.55□□□□□ -0.24
Pif1Q80SX8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.55□□□□□ -0.24
Pif1Q80SX8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.55□□□□□ -0.24
Pif1Q80SX8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.54□□□□□ -0.24
Pif1Q80SX8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pif1Q80SX8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 App-207ENSMUST00000227737 2827 ntBASIC13.53□□□□□ -0.24
Pif1Q80SX8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.53□□□□□ -0.24
Pif1Q80SX8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.53□□□□□ -0.24
Pif1Q80SX8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pif1Q80SX8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pif1Q80SX8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms