Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh8Q7TSK3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh8Q7TSK3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh8Q7TSK3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh8Q7TSK3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh8Q7TSK3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms