Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gm17808-201ENSMUST00000200859 894 ntBASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx4Q7TNK1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx4Q7TNK1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Gm29518-201ENSMUST00000190858 372 ntBASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx4Q7TNK1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rfx4Q7TNK1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms