Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubfd1Q78JW9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubfd1Q78JW9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubfd1Q78JW9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.25□□□□□ -0.13
Ubfd1Q78JW9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms