Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lsm8Q6ZWM4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm8Q6ZWM4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm8Q6ZWM4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lsm8Q6ZWM4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm8Q6ZWM4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms