Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx55Q6ZPL9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx55Q6ZPL9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Gm5279-201ENSMUST00000199575 745 ntBASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx55Q6ZPL9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Gm4984-201ENSMUST00000115987 360 ntBASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx55Q6ZPL9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx55Q6ZPL9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms