Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Gm27701-201ENSMUST00000184498 110 ntBASIC17.04■□□□□ 0.32
Nup98Q6PFD9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Nup98Q6PFD9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup98Q6PFD9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.02■□□□□ 0.32
Nup98Q6PFD9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.02■□□□□ 0.31
Nup98Q6PFD9 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.02■□□□□ 0.31
Nup98Q6PFD9 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup98Q6PFD9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Gm11524-201ENSMUST00000119349 807 ntBASIC17.01■□□□□ 0.31
Nup98Q6PFD9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Gm21470-201ENSMUST00000187680 696 ntBASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup98Q6PFD9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Mir497b-201ENSMUST00000093601 125 ntBASIC17■□□□□ 0.31
Nup98Q6PFD9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms