Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Gm25990-201ENSMUST00000102440 86 ntBASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Gm12008-201ENSMUST00000117791 755 ntBASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Gm17971-201ENSMUST00000190239 806 ntBASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd3Q6P9Z1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gm23547-201ENSMUST00000158210 271 ntBASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gm5682-201ENSMUST00000173402 505 ntBASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gm43347-201ENSMUST00000200226 580 ntBASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd3Q6P9Z1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Gm7222-201ENSMUST00000117512 906 ntBASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Gm7787-201ENSMUST00000216858 688 ntBASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd3Q6P9Z1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd3Q6P9Z1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms