Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm3961-201ENSMUST00000204425 994 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm44608-201ENSMUST00000206827 855 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm18056-201ENSMUST00000207670 568 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm18061-201ENSMUST00000208350 562 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm18063-201ENSMUST00000208529 568 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm18052-201ENSMUST00000208750 559 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Gm45930-201ENSMUST00000221330 292 ntBASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Knl1Q66JQ7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Gm12384-201ENSMUST00000119228 919 ntBASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Proscos-202ENSMUST00000178990 666 ntBASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Gm4857-201ENSMUST00000192718 785 ntBASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Knl1Q66JQ7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Knl1Q66JQ7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Gm19309-201ENSMUST00000218295 205 ntBASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Knl1Q66JQ7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Gm16342-201ENSMUST00000124025 1025 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms