Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ift88Q61371 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.25■□□□□ 0.19
Ift88Q61371 Gm15173-201ENSMUST00000122049 433 ntBASIC16.25■□□□□ 0.19
Ift88Q61371 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.25■□□□□ 0.19
Ift88Q61371 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.25■□□□□ 0.19
Ift88Q61371 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.25■□□□□ 0.19
Ift88Q61371 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ift88Q61371 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ift88Q61371 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.24■□□□□ 0.19
Ift88Q61371 Gm6550-201ENSMUST00000187574 993 ntBASIC16.24■□□□□ 0.19
Ift88Q61371 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Rps4l-201ENSMUST00000071745 943 ntBASIC16.24■□□□□ 0.19
Ift88Q61371 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.24■□□□□ 0.19
Ift88Q61371 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.24■□□□□ 0.19
Ift88Q61371 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ift88Q61371 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Ift88Q61371 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.23■□□□□ 0.19
Ift88Q61371 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ift88Q61371 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.23■□□□□ 0.19
Ift88Q61371 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ift88Q61371 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ift88Q61371 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.23■□□□□ 0.19
Ift88Q61371 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ift88Q61371 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Gm4899-201ENSMUST00000178708 719 ntBASIC16.22■□□□□ 0.19
Ift88Q61371 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.22■□□□□ 0.19
Ift88Q61371 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.22■□□□□ 0.19
Ift88Q61371 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Ift88Q61371 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms