Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Clns1aQ61189 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.56□□□□□ -0.4
Clns1aQ61189 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.56□□□□□ -0.4
Clns1aQ61189 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.56□□□□□ -0.4
Clns1aQ61189 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Clns1aQ61189 Gm45328-201ENSMUST00000210942 917 ntBASIC12.56□□□□□ -0.4
Clns1aQ61189 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clns1aQ61189 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clns1aQ61189 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clns1aQ61189 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.55□□□□□ -0.4
Clns1aQ61189 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Rubie-203ENSMUST00000227803 2430 ntBASIC12.55□□□□□ -0.4
Clns1aQ61189 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.55□□□□□ -0.4
Clns1aQ61189 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.55□□□□□ -0.4
Clns1aQ61189 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clns1aQ61189 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.54□□□□□ -0.4
Clns1aQ61189 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Gm10013-201ENSMUST00000106074 672 ntBASIC12.54□□□□□ -0.4
Clns1aQ61189 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Rprl3-201ENSMUST00000157400 290 ntBASIC12.54□□□□□ -0.4
Clns1aQ61189 Gm44454-201ENSMUST00000198541 138 ntBASIC12.54□□□□□ -0.4
Clns1aQ61189 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms