Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm3Q5F4S9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Gm5279-201ENSMUST00000199575 745 ntBASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpm3Q5F4S9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Gm13829-201ENSMUST00000119600 138 ntBASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trpm3Q5F4S9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gm11918-201ENSMUST00000121660 179 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.28■□□□□ 0.52
Trpm3Q5F4S9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpm3Q5F4S9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms