Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm13226-201ENSMUST00000117838 404 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm12390-201ENSMUST00000117897 397 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm44608-201ENSMUST00000206827 855 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm5356-201ENSMUST00000093326 615 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Gm18827-201ENSMUST00000188341 790 ntBASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef40Q3UPH7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Mir1247-201ENSMUST00000116706 82 ntBASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Mir1982-201ENSMUST00000157368 74 ntBASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Snora78-201ENSMUST00000158630 128 ntBASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Gm5425-201ENSMUST00000214125 459 ntBASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef40Q3UPH7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef40Q3UPH7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Arhgef40Q3UPH7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC21.2■□□□□ 0.99
Arhgef40Q3UPH7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Arhgef40Q3UPH7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Gm4804-201ENSMUST00000182234 999 ntBASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Gm18307-201ENSMUST00000206864 949 ntBASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 AC156560.2-201ENSMUST00000221232 264 ntBASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms