Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Gm2756-201ENSMUST00000195851 400 ntBASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc4Q3UP44 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm23935-201ENSMUST00000102303 57 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm24270-201ENSMUST00000102326 57 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm24245-201ENSMUST00000157318 57 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Mir6990-201ENSMUST00000183724 91 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm43575-201ENSMUST00000196420 516 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm44335-201ENSMUST00000196879 141 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm44297-201ENSMUST00000198304 141 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm44346-201ENSMUST00000198851 141 ntBASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.47□□□□□ -0.25
Nhlrc4Q3UP44 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Gm9182-201ENSMUST00000217829 639 ntBASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
Nhlrc4Q3UP44 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc4Q3UP44 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.45□□□□□ -0.26
Nhlrc4Q3UP44 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms