Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Fndc4Q3TR08 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Gm11780-201ENSMUST00000136880 516 ntBASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Mir8098-201ENSMUST00000184011 137 ntBASIC12.53□□□□□ -0.4
Fndc4Q3TR08 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Gm6296-201ENSMUST00000222599 943 ntBASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fndc4Q3TR08 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fndc4Q3TR08 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Gm6376-201ENSMUST00000209407 580 ntBASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms