Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm5070-201ENSMUST00000177599 862 ntBASIC13.01□□□□□ -0.33
Chd8Q09XV5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm14028-201ENSMUST00000117434 479 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Gm8213-201ENSMUST00000118191 441 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm21769-201ENSMUST00000211922 111 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13□□□□□ -0.33
Chd8Q09XV5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm10275-202ENSMUST00000168697 495 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13□□□□□ -0.33
Chd8Q09XV5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm3318-201ENSMUST00000217604 1183 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Chd8Q09XV5 Gm10275-201ENSMUST00000092620 635 ntBASIC13□□□□□ -0.33
Chd8Q09XV5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chd8Q09XV5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Gm9083-201ENSMUST00000120423 819 ntBASIC12.99□□□□□ -0.33
Chd8Q09XV5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.99□□□□□ -0.33
Chd8Q09XV5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.99□□□□□ -0.33
Chd8Q09XV5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.99□□□□□ -0.33
Chd8Q09XV5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.98□□□□□ -0.33
Chd8Q09XV5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Gm7600-201ENSMUST00000209657 785 ntBASIC12.98□□□□□ -0.33
Chd8Q09XV5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.98□□□□□ -0.33
Chd8Q09XV5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms