Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcr5Q04683 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcr5Q04683 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcr5Q04683 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.97□□□□□ -0.17
Cxcr5Q04683 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Gm18246-201ENSMUST00000221023 728 ntBASIC13.97□□□□□ -0.17
Cxcr5Q04683 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.97□□□□□ -0.17
Cxcr5Q04683 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcr5Q04683 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Gm28033-201ENSMUST00000184224 96 ntBASIC13.96□□□□□ -0.17
Cxcr5Q04683 Ank2-226ENSMUST00000189368 339 ntBASIC13.96□□□□□ -0.17
Cxcr5Q04683 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcr5Q04683 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cxcr5Q04683 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.95□□□□□ -0.18
Cxcr5Q04683 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Gm7230-201ENSMUST00000173026 815 ntBASIC13.95□□□□□ -0.18
Cxcr5Q04683 Gm45167-201ENSMUST00000208007 322 ntBASIC13.95□□□□□ -0.18
Cxcr5Q04683 Birc2-201ENSMUST00000054878 378 ntBASIC13.95□□□□□ -0.18
Cxcr5Q04683 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cxcr5Q04683 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms