Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.47□□□□□ -0.73
Rpl39P62892 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.47□□□□□ -0.73
Rpl39P62892 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.47□□□□□ -0.73
Rpl39P62892 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Gm10499-201ENSMUST00000174094 934 ntBASIC10.47□□□□□ -0.73
Rpl39P62892 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.47□□□□□ -0.73
Rpl39P62892 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.47□□□□□ -0.73
Rpl39P62892 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.46□□□□□ -0.73
Rpl39P62892 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.46□□□□□ -0.73
Rpl39P62892 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.46□□□□□ -0.73
Rpl39P62892 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.46□□□□□ -0.73
Rpl39P62892 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Gm43767-201ENSMUST00000198933 381 ntBASIC10.46□□□□□ -0.73
Rpl39P62892 Gm7506-201ENSMUST00000207758 815 ntBASIC10.46□□□□□ -0.73
Rpl39P62892 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.46□□□□□ -0.73
Rpl39P62892 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.46□□□□□ -0.73
Rpl39P62892 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rpl39P62892 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.46□□□□□ -0.74
Rpl39P62892 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.46□□□□□ -0.74
Rpl39P62892 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rpl39P62892 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.46□□□□□ -0.74
Rpl39P62892 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.45□□□□□ -0.74
Rpl39P62892 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.45□□□□□ -0.74
Rpl39P62892 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rpl39P62892 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.45□□□□□ -0.74
Rpl39P62892 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm12497-201ENSMUST00000138778 237 ntBASIC10.45□□□□□ -0.74
Rpl39P62892 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.45□□□□□ -0.74
Rpl39P62892 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.45□□□□□ -0.74
Rpl39P62892 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm29518-201ENSMUST00000190858 372 ntBASIC10.45□□□□□ -0.74
Rpl39P62892 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.45□□□□□ -0.74
Rpl39P62892 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rpl39P62892 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rpl39P62892 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms