Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.77■□□□□ 0.12
Nub1P54729 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.77■□□□□ 0.12
Nub1P54729 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
Nub1P54729 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Nub1P54729 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Nub1P54729 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.77■□□□□ 0.12
Nub1P54729 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.77■□□□□ 0.12
Nub1P54729 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Nub1P54729 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nub1P54729 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Nub1P54729 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Nub1P54729 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Nub1P54729 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
Nub1P54729 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Nub1P54729 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.77■□□□□ 0.11
Nub1P54729 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Nub1P54729 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nub1P54729 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nub1P54729 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Gm15483-201ENSMUST00000120338 456 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.76■□□□□ 0.11
Nub1P54729 Gm11025-201ENSMUST00000140773 466 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Gm45612-201ENSMUST00000211320 160 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nub1P54729 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.76■□□□□ 0.11
Nub1P54729 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Nub1P54729 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.76■□□□□ 0.11
Nub1P54729 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Nub1P54729 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nub1P54729 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nub1P54729 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm13464-201ENSMUST00000119418 935 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.75■□□□□ 0.11
Nub1P54729 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.75■□□□□ 0.11
Nub1P54729 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.75■□□□□ 0.11
Nub1P54729 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.75■□□□□ 0.11
Nub1P54729 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms