Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nek1P51954 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nek1P51954 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Nek1P51954 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.36■□□□□ 0.21
Nek1P51954 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.36■□□□□ 0.21
Nek1P51954 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nek1P51954 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nek1P51954 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.36■□□□□ 0.21
Nek1P51954 Gm4899-201ENSMUST00000178708 719 ntBASIC16.36■□□□□ 0.21
Nek1P51954 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.36■□□□□ 0.21
Nek1P51954 Gm18246-201ENSMUST00000221023 728 ntBASIC16.36■□□□□ 0.21
Nek1P51954 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nek1P51954 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Nek1P51954 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.36■□□□□ 0.21
Nek1P51954 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.36■□□□□ 0.21
Nek1P51954 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.36■□□□□ 0.21
Nek1P51954 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nek1P51954 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Nek1P51954 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.36■□□□□ 0.21
Nek1P51954 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nek1P51954 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nek1P51954 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nek1P51954 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Nek1P51954 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.35■□□□□ 0.21
Nek1P51954 Mir8117-201ENSMUST00000184773 107 ntBASIC16.35■□□□□ 0.21
Nek1P51954 Gm7787-201ENSMUST00000216858 688 ntBASIC16.35■□□□□ 0.21
Nek1P51954 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nek1P51954 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.35■□□□□ 0.21
Nek1P51954 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.35■□□□□ 0.21
Nek1P51954 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nek1P51954 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
Nek1P51954 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nek1P51954 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.34■□□□□ 0.21
Nek1P51954 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nek1P51954 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nek1P51954 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.34■□□□□ 0.21
Nek1P51954 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.34■□□□□ 0.21
Nek1P51954 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.34■□□□□ 0.21
Nek1P51954 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.34■□□□□ 0.21
Nek1P51954 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.34■□□□□ 0.21
Nek1P51954 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Nek1P51954 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.34■□□□□ 0.21
Nek1P51954 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Nek1P51954 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nek1P51954 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nek1P51954 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms