Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Brca1P48754 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.2■□□□□ 0.18
Brca1P48754 Gm15376-201ENSMUST00000122258 783 ntBASIC16.2■□□□□ 0.18
Brca1P48754 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Mir3102-201ENSMUST00000175555 104 ntBASIC16.2■□□□□ 0.18
Brca1P48754 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.2■□□□□ 0.18
Brca1P48754 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.2■□□□□ 0.18
Brca1P48754 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.2■□□□□ 0.18
Brca1P48754 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brca1P48754 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.19■□□□□ 0.18
Brca1P48754 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Brca1P48754 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.19■□□□□ 0.18
Brca1P48754 Gm24644-201ENSMUST00000157114 139 ntBASIC16.19■□□□□ 0.18
Brca1P48754 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.19■□□□□ 0.18
Brca1P48754 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.19■□□□□ 0.18
Brca1P48754 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brca1P48754 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Brca1P48754 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Brca1P48754 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Brca1P48754 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.18■□□□□ 0.18
Brca1P48754 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.18■□□□□ 0.18
Brca1P48754 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Brca1P48754 Mir8109-201ENSMUST00000184375 117 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Gm29127-201ENSMUST00000188304 517 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Gm43118-201ENSMUST00000199149 775 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Gm7287-201ENSMUST00000205267 602 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.18■□□□□ 0.18
Brca1P48754 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.18■□□□□ 0.18
Brca1P48754 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.18■□□□□ 0.18
Brca1P48754 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Brca1P48754 Gm7399-201ENSMUST00000032395 858 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Brca1P48754 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Brca1P48754 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.18■□□□□ 0.18
Brca1P48754 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Brca1P48754 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.18■□□□□ 0.18
Brca1P48754 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.17■□□□□ 0.18
Brca1P48754 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Gm6091-201ENSMUST00000098307 165 ntBASIC16.17■□□□□ 0.18
Brca1P48754 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms