Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf9P41274 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf9P41274 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf9P41274 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.04□□□□□ -0.16
Tnfsf9P41274 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.03□□□□□ -0.16
Tnfsf9P41274 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gm45098-201ENSMUST00000207179 657 ntBASIC14.03□□□□□ -0.16
Tnfsf9P41274 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.03□□□□□ -0.16
Tnfsf9P41274 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf9P41274 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.03□□□□□ -0.16
Tnfsf9P41274 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.02□□□□□ -0.16
Tnfsf9P41274 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.02□□□□□ -0.16
Tnfsf9P41274 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf9P41274 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Gm15693-201ENSMUST00000120470 637 ntBASIC14.02□□□□□ -0.17
Tnfsf9P41274 Gm14057-201ENSMUST00000120631 482 ntBASIC14.02□□□□□ -0.17
Tnfsf9P41274 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfsf9P41274 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.02□□□□□ -0.17
Tnfsf9P41274 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf9P41274 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.01□□□□□ -0.17
Tnfsf9P41274 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Gm27622-201ENSMUST00000183779 60 ntBASIC14.01□□□□□ -0.17
Tnfsf9P41274 Mir7023-201ENSMUST00000185093 64 ntBASIC14.01□□□□□ -0.17
Tnfsf9P41274 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.01□□□□□ -0.17
Tnfsf9P41274 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf9P41274 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.01□□□□□ -0.17
Tnfsf9P41274 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms