Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tyms-ps-201ENSMUST00000219550 915 ntBASIC21.68■■□□□ 1.06
Chd1P40201 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Chd1P40201 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Chd1P40201 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Chd1P40201 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC21.67■■□□□ 1.06
Chd1P40201 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC21.67■■□□□ 1.06
Chd1P40201 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC21.67■■□□□ 1.06
Chd1P40201 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Gm27320-201ENSMUST00000184892 109 ntBASIC21.67■■□□□ 1.06
Chd1P40201 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC21.67■■□□□ 1.06
Chd1P40201 Gm7118-201ENSMUST00000200167 1003 ntBASIC21.67■■□□□ 1.06
Chd1P40201 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Chd1P40201 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Chd1P40201 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC21.67■■□□□ 1.06
Chd1P40201 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd1P40201 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Gm25927-201ENSMUST00000175058 117 ntBASIC21.66■■□□□ 1.06
Chd1P40201 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC21.66■■□□□ 1.06
Chd1P40201 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC21.66■■□□□ 1.06
Chd1P40201 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC21.66■■□□□ 1.06
Chd1P40201 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 App-207ENSMUST00000227737 2827 ntBASIC21.66■■□□□ 1.06
Chd1P40201 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Chd1P40201 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC21.66■■□□□ 1.06
Chd1P40201 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC21.66■■□□□ 1.06
Chd1P40201 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC21.66■■□□□ 1.06
Chd1P40201 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC21.66■■□□□ 1.06
Chd1P40201 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC21.66■■□□□ 1.06
Chd1P40201 Gm24420-201ENSMUST00000176676 59 ntBASIC21.66■■□□□ 1.06
Chd1P40201 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Chd1P40201 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd1P40201 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 AC114543.1-201ENSMUST00000226451 1558 ntBASIC21.65■■□□□ 1.06
Chd1P40201 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Gm3756-201ENSMUST00000169182 1355 ntBASIC21.65■■□□□ 1.06
Chd1P40201 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC21.65■■□□□ 1.06
Chd1P40201 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC21.65■■□□□ 1.06
Chd1P40201 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Chd1P40201 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd1P40201 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Chd1P40201 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Chd1P40201 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Chd1P40201 Gm11557-201ENSMUST00000120200 1008 ntBASIC21.64■■□□□ 1.06
Chd1P40201 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC21.64■■□□□ 1.06
Chd1P40201 Gm8927-201ENSMUST00000181978 981 ntBASIC21.64■■□□□ 1.06
Chd1P40201 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Chd1P40201 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd1P40201 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd1P40201 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
Chd1P40201 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd1P40201 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd1P40201 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC21.63■■□□□ 1.05
Chd1P40201 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Gm43289-201ENSMUST00000200537 1475 ntBASIC21.63■■□□□ 1.05
Chd1P40201 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Chd1P40201 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC21.63■■□□□ 1.05
Chd1P40201 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC21.63■■□□□ 1.05
Chd1P40201 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC21.63■■□□□ 1.05
Chd1P40201 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1P40201 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chd1P40201 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms