Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.78□□□□□ -0.04
Fen1P39749 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Gm27357-201ENSMUST00000183754 135 ntBASIC14.78□□□□□ -0.04
Fen1P39749 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.78□□□□□ -0.04
Fen1P39749 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fen1P39749 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Fen1P39749 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fen1P39749 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Fen1P39749 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Fen1P39749 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
Fen1P39749 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.77□□□□□ -0.04
Fen1P39749 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fen1P39749 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.77□□□□□ -0.05
Fen1P39749 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Fen1P39749 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.77□□□□□ -0.05
Fen1P39749 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.77□□□□□ -0.05
Fen1P39749 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Fen1P39749 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Fen1P39749 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.77□□□□□ -0.05
Fen1P39749 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fen1P39749 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gm23547-201ENSMUST00000158210 271 ntBASIC14.76□□□□□ -0.05
Fen1P39749 Gm10499-201ENSMUST00000174094 934 ntBASIC14.76□□□□□ -0.05
Fen1P39749 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Fen1P39749 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.76□□□□□ -0.05
Fen1P39749 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.76□□□□□ -0.05
Fen1P39749 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms