Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Gm11425-201ENSMUST00000119608 498 ntBASIC13.5□□□□□ -0.25
Sftpa1P35242 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.5□□□□□ -0.25
Sftpa1P35242 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Gm9396-201ENSMUST00000076703 567 ntBASIC13.5□□□□□ -0.25
Sftpa1P35242 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sftpa1P35242 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Sftpa1P35242 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm13464-201ENSMUST00000119418 935 ntBASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.49□□□□□ -0.25
Sftpa1P35242 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.49□□□□□ -0.25
Sftpa1P35242 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.49□□□□□ -0.25
Sftpa1P35242 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sftpa1P35242 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sftpa1P35242 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sftpa1P35242 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sftpa1P35242 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sftpa1P35242 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sftpa1P35242 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.48□□□□□ -0.25
Sftpa1P35242 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sftpa1P35242 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms