Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.57□□□□□ -0.24
Nedd8P29595 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.57□□□□□ -0.24
Nedd8P29595 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nedd8P29595 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Nedd8P29595 Grk6-205ENSMUST00000224653 2976 ntBASIC13.56□□□□□ -0.24
Nedd8P29595 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nedd8P29595 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.56□□□□□ -0.24
Nedd8P29595 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nedd8P29595 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.56□□□□□ -0.24
Nedd8P29595 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm37722-201ENSMUST00000193757 208 ntBASIC13.56□□□□□ -0.24
Nedd8P29595 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.56□□□□□ -0.24
Nedd8P29595 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Nedd8P29595 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.56□□□□□ -0.24
Nedd8P29595 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nedd8P29595 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Nedd8P29595 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Nedd8P29595 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm8825-201ENSMUST00000182565 998 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm4518-201ENSMUST00000182638 718 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.55□□□□□ -0.24
Nedd8P29595 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.55□□□□□ -0.24
Nedd8P29595 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.55□□□□□ -0.24
Nedd8P29595 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nedd8P29595 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nedd8P29595 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Nedd8P29595 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.54□□□□□ -0.24
Nedd8P29595 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms