Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.69□□□□□ -0.22
Clk1P22518 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.69□□□□□ -0.22
Clk1P22518 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.69□□□□□ -0.22
Clk1P22518 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.69□□□□□ -0.22
Clk1P22518 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.69□□□□□ -0.22
Clk1P22518 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.69□□□□□ -0.22
Clk1P22518 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.69□□□□□ -0.22
Clk1P22518 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clk1P22518 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.68□□□□□ -0.22
Clk1P22518 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.68□□□□□ -0.22
Clk1P22518 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clk1P22518 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.68□□□□□ -0.22
Clk1P22518 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.68□□□□□ -0.22
Clk1P22518 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.68□□□□□ -0.22
Clk1P22518 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.68□□□□□ -0.22
Clk1P22518 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clk1P22518 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clk1P22518 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clk1P22518 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Gm2272-201ENSMUST00000194903 582 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Gm43767-201ENSMUST00000198933 381 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Gm18246-201ENSMUST00000221023 728 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Gm7461-201ENSMUST00000058918 827 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.67□□□□□ -0.22
Clk1P22518 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Clk1P22518 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clk1P22518 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clk1P22518 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms