Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Gm18889-201ENSMUST00000174284 929 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Gm27622-201ENSMUST00000183779 60 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Gm42660-201ENSMUST00000197733 947 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Rprl2-201ENSMUST00000157150 290 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Mir6977-201ENSMUST00000184960 64 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Gm6546-201ENSMUST00000192096 766 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf9P20334 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf9P20334 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Mir449b-201ENSMUST00000104833 80 ntBASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm6754-201ENSMUST00000117124 913 ntBASIC12.02□□□□□ -0.49
Tnfrsf9P20334 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms