Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgn1P18608 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgn1P18608 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Hmgn1P18608 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm4535-201ENSMUST00000182274 558 ntBASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm37153-201ENSMUST00000193637 231 ntBASIC13.43□□□□□ -0.26
Hmgn1P18608 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.43□□□□□ -0.26
Hmgn1P18608 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm10355-201ENSMUST00000097146 517 ntBASIC13.43□□□□□ -0.26
Hmgn1P18608 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.43□□□□□ -0.26
Hmgn1P18608 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgn1P18608 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgn1P18608 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.42□□□□□ -0.26
Hmgn1P18608 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.42□□□□□ -0.26
Hmgn1P18608 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Hmgn1P18608 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgn1P18608 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hmgn1P18608 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.41□□□□□ -0.26
Hmgn1P18608 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.41□□□□□ -0.26
Hmgn1P18608 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Gm9726-201ENSMUST00000180321 678 ntBASIC13.41□□□□□ -0.26
Hmgn1P18608 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgn1P18608 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.41□□□□□ -0.26
Hmgn1P18608 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgn1P18608 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms