Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.25□□□□□ -0.45
CfdP03953 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Acot6-202ENSMUST00000222921 3622 ntBASIC12.25□□□□□ -0.45
CfdP03953 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.25□□□□□ -0.45
CfdP03953 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
CfdP03953 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
CfdP03953 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
CfdP03953 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CfdP03953 Gm17808-201ENSMUST00000200859 894 ntBASIC12.25□□□□□ -0.45
CfdP03953 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.25□□□□□ -0.45
CfdP03953 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.25□□□□□ -0.45
CfdP03953 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.25□□□□□ -0.45
CfdP03953 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.25□□□□□ -0.45
CfdP03953 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CfdP03953 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CfdP03953 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
CfdP03953 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CfdP03953 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CfdP03953 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CfdP03953 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.24□□□□□ -0.45
CfdP03953 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Gm29518-201ENSMUST00000190858 372 ntBASIC12.24□□□□□ -0.45
CfdP03953 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.24□□□□□ -0.45
CfdP03953 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.24□□□□□ -0.45
CfdP03953 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.24□□□□□ -0.45
CfdP03953 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
CfdP03953 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CfdP03953 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CfdP03953 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.23□□□□□ -0.45
CfdP03953 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.23□□□□□ -0.45
CfdP03953 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CfdP03953 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms