Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Cops3O88543 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.16□□□□□ -0.3
Cops3O88543 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.16□□□□□ -0.3
Cops3O88543 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.16□□□□□ -0.3
Cops3O88543 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cops3O88543 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops3O88543 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cops3O88543 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.15□□□□□ -0.3
Cops3O88543 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.15□□□□□ -0.3
Cops3O88543 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.15□□□□□ -0.3
Cops3O88543 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.15□□□□□ -0.3
Cops3O88543 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Gm37153-201ENSMUST00000193637 231 ntBASIC13.15□□□□□ -0.3
Cops3O88543 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.15□□□□□ -0.3
Cops3O88543 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Cops3O88543 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.15□□□□□ -0.3
Cops3O88543 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops3O88543 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops3O88543 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cops3O88543 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms