Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.17■□□□□ 0.02
Shoc2O88520 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shoc2O88520 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.16■□□□□ 0.02
Shoc2O88520 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.16■□□□□ 0.02
Shoc2O88520 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Shoc2O88520 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.16■□□□□ 0.02
Shoc2O88520 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shoc2O88520 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shoc2O88520 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.16■□□□□ 0.02
Shoc2O88520 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shoc2O88520 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.15■□□□□ 0.02
Shoc2O88520 Gm11594-201ENSMUST00000122313 162 ntBASIC15.15■□□□□ 0.02
Shoc2O88520 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.15■□□□□ 0.02
Shoc2O88520 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shoc2O88520 Mir3113-201ENSMUST00000175478 76 ntBASIC15.15■□□□□ 0.02
Shoc2O88520 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.15■□□□□ 0.02
Shoc2O88520 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.15■□□□□ 0.02
Shoc2O88520 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.15■□□□□ 0.02
Shoc2O88520 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shoc2O88520 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shoc2O88520 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shoc2O88520 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Shoc2O88520 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shoc2O88520 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Shoc2O88520 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Shoc2O88520 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm44492-201ENSMUST00000197012 141 ntBASIC15.14■□□□□ 0.01
Shoc2O88520 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.14■□□□□ 0.01
Shoc2O88520 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.14■□□□□ 0.01
Shoc2O88520 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.14■□□□□ 0.01
Shoc2O88520 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shoc2O88520 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.13■□□□□ 0.01
Shoc2O88520 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shoc2O88520 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.13■□□□□ 0.01
Shoc2O88520 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shoc2O88520 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shoc2O88520 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms