Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SncaO55042 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SncaO55042 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SncaO55042 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.16□□□□□ -0.46
SncaO55042 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.15□□□□□ -0.46
SncaO55042 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.15□□□□□ -0.46
SncaO55042 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.15□□□□□ -0.46
SncaO55042 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.15□□□□□ -0.46
SncaO55042 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SncaO55042 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SncaO55042 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SncaO55042 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SncaO55042 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
SncaO55042 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SncaO55042 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SncaO55042 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.14□□□□□ -0.47
SncaO55042 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SncaO55042 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.14□□□□□ -0.47
SncaO55042 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.14□□□□□ -0.47
SncaO55042 Gm13418-201ENSMUST00000119097 944 ntBASIC12.14□□□□□ -0.47
SncaO55042 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.14□□□□□ -0.47
SncaO55042 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.14□□□□□ -0.47
SncaO55042 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.14□□□□□ -0.47
SncaO55042 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Gm37153-201ENSMUST00000193637 231 ntBASIC12.14□□□□□ -0.47
SncaO55042 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.14□□□□□ -0.47
SncaO55042 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms