Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clk3O35492 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.99□□□□□ -0.17
Clk3O35492 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.99□□□□□ -0.17
Clk3O35492 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Clk3O35492 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk3O35492 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clk3O35492 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Carlr-201ENSMUST00000181515 2574 ntBASIC13.99□□□□□ -0.17
Clk3O35492 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clk3O35492 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Clk3O35492 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Clk3O35492 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Gm13036-201ENSMUST00000117799 748 ntBASIC13.98□□□□□ -0.17
Clk3O35492 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.98□□□□□ -0.17
Clk3O35492 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.98□□□□□ -0.17
Clk3O35492 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Clk3O35492 Gm15590-201ENSMUST00000078419 552 ntBASIC13.98□□□□□ -0.17
Clk3O35492 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Clk3O35492 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Clk3O35492 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.98□□□□□ -0.17
Clk3O35492 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk3O35492 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.97□□□□□ -0.17
Clk3O35492 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.97□□□□□ -0.17
Clk3O35492 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.97□□□□□ -0.17
Clk3O35492 Gm5682-201ENSMUST00000173402 505 ntBASIC13.97□□□□□ -0.17
Clk3O35492 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clk3O35492 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clk3O35492 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clk3O35492 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.96□□□□□ -0.17
Clk3O35492 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clk3O35492 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clk3O35492 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.96□□□□□ -0.17
Clk3O35492 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Clk3O35492 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Clk3O35492 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.96□□□□□ -0.17
Clk3O35492 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.96□□□□□ -0.17
Clk3O35492 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.96□□□□□ -0.17
Clk3O35492 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clk3O35492 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clk3O35492 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms