Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Clcn6O35454 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Clcn6O35454 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Clcn6O35454 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn6O35454 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn6O35454 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn6O35454 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn6O35454 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn6O35454 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Clcn6O35454 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm42822-201ENSMUST00000200507 1529 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.05■□□□□ 0.16
Clcn6O35454 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm13806-201ENSMUST00000117822 325 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 Gm15227-201ENSMUST00000121844 399 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Clcn6O35454 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm38384-201ENSMUST00000195413 1122 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.05■□□□□ 0.16
Clcn6O35454 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Efs-202ENSMUST00000227037 2540 ntBASIC16.05■□□□□ 0.16
Clcn6O35454 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Clcn6O35454 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn6O35454 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Clcn6O35454 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clcn6O35454 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Tpt1-ps2-201ENSMUST00000120548 521 ntBASIC16.04■□□□□ 0.16
Clcn6O35454 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC16.04■□□□□ 0.16
Clcn6O35454 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.04■□□□□ 0.16
Clcn6O35454 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Gm8151-201ENSMUST00000184817 871 ntBASIC16.04■□□□□ 0.16
Clcn6O35454 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Gm42464-201ENSMUST00000196717 417 ntBASIC16.04■□□□□ 0.16
Clcn6O35454 AC154730.1-201ENSMUST00000227874 816 ntBASIC16.04■□□□□ 0.16
Clcn6O35454 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.04■□□□□ 0.16
Clcn6O35454 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn6O35454 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Gm24374-201ENSMUST00000104394 106 ntBASIC16.03■□□□□ 0.16
Clcn6O35454 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.03■□□□□ 0.16
Clcn6O35454 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.03■□□□□ 0.16
Clcn6O35454 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Gm17807-201ENSMUST00000186869 298 ntBASIC16.03■□□□□ 0.16
Clcn6O35454 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Clcn6O35454 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.03■□□□□ 0.16
Clcn6O35454 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Clcn6O35454 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Clcn6O35454 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms