Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Prrt1O35449 Rubie-203ENSMUST00000227803 2430 ntBASIC12.4□□□□□ -0.42
Prrt1O35449 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.4□□□□□ -0.42
Prrt1O35449 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Prrt1O35449 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.4□□□□□ -0.42
Prrt1O35449 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Prrt1O35449 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Prrt1O35449 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prrt1O35449 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Prrt1O35449 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.4□□□□□ -0.43
Prrt1O35449 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prrt1O35449 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prrt1O35449 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.39□□□□□ -0.43
Prrt1O35449 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.39□□□□□ -0.43
Prrt1O35449 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Gm44454-201ENSMUST00000198541 138 ntBASIC12.39□□□□□ -0.43
Prrt1O35449 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.39□□□□□ -0.43
Prrt1O35449 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prrt1O35449 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prrt1O35449 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.39□□□□□ -0.43
Prrt1O35449 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.38□□□□□ -0.43
Prrt1O35449 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Prrt1O35449 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms